SNP Profiles matching HUALLAGA 48

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 Key

 1234567891011121314
_Input profile
CCAAGGTTTTACTTGGCCCCAAGGCCAG
1._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
2._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
3._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
4._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
5._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
6._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
7._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
8._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
9._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
10._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
11._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
12._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
13._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
14._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
15._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
16._HUALLAGA_48
CCAAGGTTTTACTTGGCCCCAAGGCCAG
17._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
18._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
19._GC-01-009-1-09
CCAAGGTTTTACTTGGCCCCAAGGCCAG
20._HUALLAGA_48
CCAGGGTTTTACTTGGCCCCAAGGCCAG
21._HUALLAGA_3
CCAAGGTTTTACTTGGCCCCATGGCCAA
22._HUALLAGA_3
CCAAGGTTTTACTTGGCCCCATGGCCAA
23._HUALLAGA_3
CCAAGGTTTTACTTGGCCCCATGGCCAA
24._HUALLAGA_3
CCAAGGTTTTACTTGGCCCCATGGCCAA
25._HUALLAGA_3
CCAAGGTTTTACTTGGCCCCATGGCCAA
26._GC-08-156-3-55
CCAAGGTTTTACTTGGCCCCATGGCCAA
27._GC-08-156-3-55
CCAAGGTTTTACTTGGCCCCATGGCCAA
28._GC-08-156-3-55
CCAAGGTTTTACTTGGCCCCATGGCCAA
29._GC-08-156-3-55
CCAAGGTTTTACTTGGCCCCATGGCCAA
30._GC-08-156-3-55
CCAAGGTTTTACTTGGCCCCATGGCCAA
 1516171819202122232425262728
_Input profile
CTAAGGCTCTCGTTAACCAAGGGGCCCC
1._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
2._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
3._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
4._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
5._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
6._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
7._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
8._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
9._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
10._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
11._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
12._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
13._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
14._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
15._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
16._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
17._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
18._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
19._GC-01-009-1-09
CTAAGGCTCTCGTTAACCAAGGGGCCCC
20._HUALLAGA_48
CTAAGGCTCTCGTTAACCAAGGGGCCCC
21._HUALLAGA_3
CTAAGGCCCTGGGTAACCAA_GGCCCC
22._HUALLAGA_3
CTAAGGCCCTGGGTAACCAA_GGCCCC
23._HUALLAGA_3
CTAAGGCCCTGGGTAACCAA_GGCCCC
24._HUALLAGA_3
CTAAGGCCCTGGGTAACCAA_GGCCCC
25._HUALLAGA_3
CTAAGGCCCTGGGTAACCAA_GGCCCC
26._GC-08-156-3-55
CTAAGGCCCTGGGTAACCAA_GGCCCC
27._GC-08-156-3-55
CTAAGGCCCTGGGTAACCAA_GGCCCC
28._GC-08-156-3-55
CTAAGGCCCTGGGTAACCAA_GGCCCC
29._GC-08-156-3-55
CTAAGGCCCTGGGTAACCAA_GGCCCC
30._GC-08-156-3-55
CTAAGGCCCTGGGTAACCAA_GGCCCC
 293031323334353637383940  
_Input profile
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
1._HUALLAGA_48
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
2._HUALLAGA_48
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
3._HUALLAGA_48
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
4._HUALLAGA_48
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
5._HUALLAGA_48
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
6._HUALLAGA_48
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
7._GC-01-009-1-09
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
8._GC-01-009-1-09
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
9._GC-01-009-1-09
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
10._GC-01-009-1-09
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
11._GC-01-009-1-09
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
12._GC-01-009-1-09
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
13._GC-01-009-1-09
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
14._HUALLAGA_48
_GGAACTAGGGAACTGTCCTTGGX_XX_X
15._HUALLAGA_48
AAGG_CTAGGGAACTGTCCTTGGX_XX_X
16._HUALLAGA_48
AAGGAACTAG_AACTGTCCTTGGX_XX_X
17._GC-01-009-1-09
_GGAACTAGGGAACTGTCCTTGGX_XX_X
18._GC-01-009-1-09
AAGGAACTAG_AACTGTCCTTGGX_XX_X
19._GC-01-009-1-09
AAGG_CTAGGGAACTGTCCTTGGX_XX_X
20._HUALLAGA_48
AAGGAATTAGGGAACTGTCCTTGGX_XX_X
21._HUALLAGA_3
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
22._HUALLAGA_3
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
23._HUALLAGA_3
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
24._HUALLAGA_3
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
25._HUALLAGA_3
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
26._GC-08-156-3-55
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
27._GC-08-156-3-55
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
28._GC-08-156-3-55
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
29._GC-08-156-3-55
AAGGAACTAGGGAACTGTCCTTGGX_XX_X
30._GC-08-156-3-55
AAGGAACTAGGGAACTGTCCTTGGX_XX_X

Input profile: HUALLAGA_48

 
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Mars Center for Cocoa Science, Brazil
Location: 1107 14
 Dapeng Zhang, 2016

1._HUALLAGA_48

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 16 > F
 Dapeng Zhang, 2016

2._HUALLAGA_48

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 11
 Dapeng Zhang, 2016

3._HUALLAGA_48

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 10
 Dapeng Zhang, 2016

4._HUALLAGA_48

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 8
 Dapeng Zhang, 2016

5._HUALLAGA_48

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 3
 Dapeng Zhang, 2016

6._HUALLAGA_48

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 2
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

7._HUALLAGA_48 GC-01-009-1-09

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._HUALLAGA_48 GC-01-009-1-09

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._HUALLAGA_48 GC-01-009-1-09

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

10._HUALLAGA_48 GC-01-009-1-09

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

11._HUALLAGA_48 GC-01-009-1-09

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

12._HUALLAGA_48 GC-01-009-1-09

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

13._HUALLAGA_48 GC-01-009-1-09

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16 > FP3
 Mars, 2018

14._HUALLAGA_48

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 1 > FP
 Dapeng Zhang, 2016

15._HUALLAGA_48

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 9
 Dapeng Zhang, 2016

16._HUALLAGA_48

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1107 5
 Dapeng Zhang, 2016

17._HUALLAGA_48 GC-01-009-1-09

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

18._HUALLAGA_48 GC-01-009-1-09

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

19._HUALLAGA_48 GC-01-009-1-09

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

20._HUALLAGA_48

97.5 %
40 shared markers

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PERICT
 Dapeng Zhang, 2016

21._HUALLAGA_3

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8355 10
 Dapeng Zhang, 2016

22._HUALLAGA_3

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8355 8
 Dapeng Zhang, 2016

23._HUALLAGA_3

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8355 6
 Dapeng Zhang, 2016

24._HUALLAGA_3

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8355 5
 Dapeng Zhang, 2016

25._HUALLAGA_3

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8355 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

26._HUALLAGA_3 GC-08-156-3-55

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

27._HUALLAGA_3 GC-08-156-3-55

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

28._HUALLAGA_3 GC-08-156-3-55

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

29._HUALLAGA_3 GC-08-156-3-55

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

30._HUALLAGA_3 GC-08-156-3-55

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25